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Tag: q-bio.QM

PMO-Dock: Benchmarking Docking, Specificity, and Generalization in Molecular Optimization

PMO-Dock: Benchmarking Docking, Specificity, and Generalization in Molecular Optimization

October 15, 2026

[Submitted on 13 Oct 2026] View PDF HTML (experimental) Abstract:The Practical Molecular Optimization (PMO) benchmark standardized evaluation in molecular optimization,…

Do Vision CIL Methods Transfer to Protein? A Diagnostic Benchmark of Frozen Protein Encoders

Do Vision CIL Methods Transfer to Protein? A Diagnostic Benchmark of Frozen Protein Encoders

October 15, 2026

[Submitted on 1 Oct 2026] View PDF HTML (experimental) Abstract:Protein function annotation operates over an expanding label space, making class-incremental…

MRFlow: Mechanism-Structured Residual Flow Matching for Virtual Cell Perturbation Prediction

MRFlow: Mechanism-Structured Residual Flow Matching for Virtual Cell Perturbation Prediction

October 14, 2026

[Submitted on 10 Sep 2026] View PDF HTML (experimental) Abstract:Predicting cellular responses to chemical and genetic perturbations is a central…

Forecasting Without Full Identification: Reliability and Computational Cost in Clot-Growth Simulation

Forecasting Without Full Identification: Reliability and Computational Cost in Clot-Growth Simulation

October 14, 2026

[Submitted on 8 Aug 2026 (v1), last revised 13 Oct 2026 (this version, v2)] View PDF HTML (experimental) Abstract:We forecast…

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